Publication Library

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1483-P: Identifying Conditional Dependence of Proteins Regulating Islet Biology with Machine Learning

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High-content phenotypic analysis of a C. elegans recombinant inbred population identifies genetic and molecular regulators of lifespan

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Boosting the Sensitivity of Quantitative Single-Cell Proteomics with Infrared-Tandem Mass Tags

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LipiDex 2 Integrates MSn Tree-Based Fragmentation Methods and Quality Control Modules to Improve Discovery Lipidomics

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Chemical Proteomics Strategies for Analyzing Protein Lipidation Reveal the Bacterial O-Mycoloylome

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Offline Two-dimensional Liquid Chromatography-Mass Spectrometry for Deep Annotation of the Fecal Metabolome

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Succinate dehydrogenase–complex II regulates skeletal muscle cellular respiration and contractility but not muscle mass in genetically induced pulmonary emphysema

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High-throughput relative quantification of fatty acids by 12-plex isobaric labeling and microchip capillary electrophoresis – Mass spectrometry

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Post-GWAS multiomic functional investigation of the TNIP1 locus in Alzheimer’s disease highlights a potential role for GPX3

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Signaling through the nicotinic acetylcholine receptor in the liver protects against the development of metabolic dysfunction-associated steatohepatitis

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Cell type specific gene therapy confers protection against motor neuron disease caused by a TFG variant

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In-Depth Chemical Analysis of the Brain Extracellular Space Using In Vivo Microdialysis with Liquid Chromatography-Tandem Mass Spectrometry

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Preparation of high-efficiency HILIC capillary columns utilizing slurry packing at 2100 bar

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Recent Advances in Labeling-Based Quantitative Glycomics: From High-Throughput Quantification to Structural Elucidation

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12-Plex Isobaric Multiplex Labeling Reagents for Carbonyl-Containing Compound (SUGAR) Tag-Enabled High-Throughput Quantitative Glycomics

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sn-Position-Resolved Quantification of Aminophospholipids by Isotopic N, N-Dimethyl Leucine Labeling and High-Resolution Ion Mobility Mass Spectrometry

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CHRISTMAS: Chiral Pair Isobaric Labeling Strategy for Multiplexed Absolute Quantitation of Enantiomeric Amino Acids

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Cysteine Counting via Isotopic Chemical Labeling for Intact Mass Proteoform Identifications in Tissue

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Plasma metabolomics supports non-fasted sampling for metabolic profiling across a spectrum of glucose tolerance in the Nile rat model for type 2 diabetes

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A transcriptional network governing ceramide homeostasis establishes a cytokine-dependent developmental process

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HIV-1 virological synapse formation enhances infection spread by dysregulating Aurora Kinase B

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DiLeu Isobaric Labeling Coupled with Limited Proteolysis Mass Spectrometry for High-Throughput Profiling of Protein Structural Changes in Alzheimer’s Disease

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Regulation of DNA damage and transcriptional output in the vasculature through a cytoglobin-HMGB2 axis

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Development of novel isobaric tags enables accurate and sensitive multiplexed proteomics using complementary ions

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Improved Structural Characterization of Glycerophospholipids and Sphingomyelins with Real-Time Library Searching

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Systematic analysis of metabolic bottlenecks in the methylerythritol 4-phosphate (MEP) pathway of Zymomonas mobilis

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The citrate transporters SLC13A5 and SLC25A1 elicit different metabolic responses and phenotypes in the mouse

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PKA regulatory subunit Bcy1 couples growth, lipid metabolism, and fermentation during anaerobic xylose growth in Saccharomyces cerevisiae

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Large‐scale proteome and metabolome analysis of CSF implicates altered glucose and carbon metabolism and succinylcarnitine in Alzheimer’s disease

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Aim18p and Aim46p are chalcone isomerase domain-containing mitochondrial hemoproteins in Saccharomyces cerevisiae

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Systematic analysis of metabolic bottlenecks in the methylerythritol 4-phosphate (MEP) pathway of Zymomonas mobilis

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Genetic mapping of microbial and host traits reveals production of immunomodulatory lipids by Akkermansia muciniphila in the murine gut

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DiLeu: Enhanced Isobaric N,N-Dimethyl Leucine Tagging Strategy for a Comprehensive Quantitative Glycoproteomic Analysis

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Novel Isobaric Tagging Reagent Enabled Multiplex Quantitative Glycoproteomics via Electron-Transfer/Higher-Energy Collisional Dissociation (EThcD) Mass Spectrometry

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Spatial Snapshots of Amyloid Precursor Protein Intramembrane Processing via Early Endosome Proteomics

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Isotopic N,N-dimethyl leucine tags for absolute quantification of clustering and apolipoprotein E in Alzheimer’s disease

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The transcriptional elongation factor CTR9 demarcates PRC2-mediated H3K27me3 domains by altering PRC2 subtype equilibrium

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12-Plex DiLeu Isobaric Labeling Enabled High-Throughput Investigation of Citrullination Alterations in the DNA Damage Response

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Increased expression of SLC25A1/CIC causes an autistic-like phenotype with altered neuron morphology

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SLC13A5/sodium-citrate co-transporter overexpression causes disrupted white matter integrity and an autistic-like phenotype

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Maximizing MS/MS Acquisition for Lipidomics Using Capillary Separation and Orbitrap Tribrid Mass Spectrometer

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Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States

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Discovery Proteomics Analysis Determines That Driver Oncogenes Suppress Antiviral Defense Pathways Through Reduction in Interferon-β Autocrine Stimulation

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High-Throughput, Comprehensive Single-Cell Proteomic Analysis of Xenopus laevis Embryos at the 50-Cell Stage Using a Microplate-Based MICROFASP System

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Practical Effects of Intramolecular Hydrogen Rearrangement in Electron Transfer Dissociation-Based Proteomics

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Proteomic and metabolomic profiling of acute and chronic stress events associated with military exercises

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The molecular and metabolic program for adaptation of white adipocytes to cool physiologic temperatures

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Loss of C2orf69 defines a fatal autoinflammatory syndrome in humans and zebrafish that evokes a glycogen-storage-associated mitochondriopathy

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A multi-omic investigation of male lower urinary tract symptoms: Potential role for JC virus

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SDH Subunit C Regulates Muscle Oxygen Consumption and Fatigability in an Animal Model of Pulmonary Emphysema

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Acetyl-CoA flux from the cytosol to the ER regulates engagement and quality of the secretory pathway

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Proteome-wide and matrisome-specific alterations during human pancreas development and maturation

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A Deep Analysis of the Proteomic and Phosphoproteomic Alterations that Occur in Skeletal Muscle after the Onset of Immobilization

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Unique inflammatory profile is associated with higher SARS-CoV-2 acute respiratory distress syndrome (ARDS) mortality

full textMetabolomic Biomarkers Differentiate Soy Sauce Freshness under
Metabolomic Biomarkers Differentiate Soy Sauce Freshness under
Conditions of Accelerated Storage

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Mapping of the contraction-induced phosphoproteome identifies TRIM28 as a significant regulator of skeletal muscle size and function

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PCarbomer-based adjuvant elicits CD8 T-cell immunity by inducing a distinct metabolic state in cross-presenting dendritic cells

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Survival Following Traumatic Brain Injury in Drosophila Is Increased by Heterozygosity for a Mutation of the NF-κB Innate Immune Response Transcription Factor Relish

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Global Phosphoproteome Analysis Using High-Field Asymmetric Waveform Ion Mobility Spectrometry on a Hybrid Orbitrap Mass Spectrometer

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Integrated Label-Free and 10-plex DiLeu Isobaric Tag Quantitative Methods for Profiling Changes in the Mouse Hypothalamic Neuropeptidome and Proteome: Assessment of the Impact of the Gut Microbiome

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Mapping physiological ADP-ribosylation using Activated Ion Electron Transfer Dissociation (AI-ETD)

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Highly multiplexed quantitative proteomic and phosphoproteomic analyses in vascular smooth muscle cell dedifferentiation

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Isobaric labeling strategy utilizing 4-plex N,N-dimethyl leucine (DiLeu) tags reveals proteomic changes induced by chemotherapy in cerebrospinal fluid of children with B-cell acute lymphoblastic leukemia

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Established biomarkers of COPD reflect skeletal muscle integrity’s response to exercise in an animal model of pulmonary emphysema

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Spatiotemporal proteomics reveals the molecular consequences of hormone treatment in a mouse model of lower urinary tract dysfunction

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In utero and lactational 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) exposure exacerbates urinary dysfunction in hormone-treated C57BL/6J mice…

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Proteomic modulation in the dorsal spinal cord following spinal cord stimulation therapy in an in vivo neuropathic pain model

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Quantitative Capillary Zone Electrophoresis-Mass Spectrometry Reveals the N-glycome Developmental Plan during Vertebrate Embryogenesis

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Broad and thematic remodeling of the surfaceome and glycoproteome on isogenic cells transformed with driving proliferative oncogene

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Ribonucleic acid sequence characterization by negative electron transfer dissociation mass spectrometry

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High-Resolution Enabled 5-plex Mass Defect-based N,N-Dimethyl Leucine Tags for Quantitative Proteomics

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IL13-driven pulmonary emphysema leads to skeletal muscle dysfunction attenuated by endurance exercise

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A Strategy for Discovery and Verification of Candidate Biomarkers in Cerebrospinal Fluid of Preclinical Alzheimer’s Disease

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Proteomic and transcriptomic analyses of early and late-chronic Toxoplasma gondii infection shows novel and stage specific transcripts

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High CO2 down-regulates skeletal muscle protein anabolism via AMPKα2-mediated depressed ribosomal biogenesis

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Metandem: An online software tool for mass spectrometry-basedisobaric labeling metabolomics

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Pptc7 is an essential phosphatase for promoting mammalian mitochondrial metabolism and biogenesis

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Polo-like Kinase 4 Maintains Centriolar Satellite Integrity By Phosphorylation Of Centrosomal Protein 131 (CEP131)

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Acetyl-CoA Flux Regulates the proteome and Acetyl-Proteome to Maintain Intracellular Metabolic Crosstalk

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Single-Shot Capillary Zone Electrophoresis-Tandem Mass Spectrometry Produces Over 4400 Phosphopeptide Identifications from 220 ng Sample

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Interactive Peptide Spectral Annotator: A Versatile Web-Based Tool for Proteomic Applications

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Capillary Zone Electrophoresis-Tandem Mass Spectrometry with Activated Ion Electron Transfer Dissociation for Large-scale Top-down Proteomics

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Quantitative Proteomics for Analyses of Multiple Samples in Parallel with Chemical Perturbation

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Quantitative Proteomic Analysis of a Genetically Induced Prostate Inflammation Mouse Model via Custom 4-plex DiLeu Isobaric Labeling

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S-adenosylmethionine biosynthesis is a targetable metabolic vulnerability of cancer stem cells

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The Value of Activated Ion Electron Transfer Dissociation for High-Throughput Top-Down Characterization of Intact Proteins

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Single Shot Electrophoresis-Mass Spectrometry Produces Over 27,000 Peptide and Nearly 4,400 Protein Identifications

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Islet proteomics reveals genetic variation in dopamine production resulting in altered insulin secretion

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The GIS2 Gene Is Repressed by a Zinc-Regulated Bicistronic RNA in Saccharomyces cerevisiae

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Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response

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Large-Scale Differentiation and Site Specific Discrimination of Hydroxyproline Isomers by EThcD Mass Spectrometry

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Multi-omics reveal specific targets of the RNA-binding protein Puf3p in mitochondrial biogenesis

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Further Multiplexing with Quantitative Proteomics Enabled by Mass Defect and High Resolution MS

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